PyRx 0.8 Release Announcement Print
Written by Sarkis Dallakian   

I'm pleased to announce the release of PyRx 0.8. Here is what's new in this new release:

Version 0.8 - 30 December 2010

[84] Implemented Vina Web Services client and added remote executaition mode for Vina wizard.

http://pyrx.scripps.edu/images/84_vina.png

[83] Changed web service URI from http://ws.nbcr.net to http://kryptonite.nbcr.net. Opal client distributed with PyRx is compatible with Opal2 services running on this new server.

[80] We now show ScrolledMessageDialog with TraceBack when PyRx fails to start.

[76] Exporting SDF in Analyze Results allows to specify the Number of Poses to Retain. This option is available through Edit -> Preferences. In the case of Vina results, we sort the result using Vina Binding Affinity before saving the result. For AutoDock 4, sorting is done using Binding Energy.

http://pyrx.scripps.edu/images/76_pref.png

[75] Implemented update feature available through Help -> Check for Updates menu. This enables users to get the latest features and bug fixes more easily. http://pyrx.scripps.edu/images/75_update.png

[74] Made a number of important changes and bug fixes related to flexible residue generation and docking. In particular the names of flexible and rigid parts of a macromolecule now ends with '_flex.pdbqt' and '_rigid.pdbqt', respectively. http://pyrx.scripps.edu/images/flex_rigid_74.png

[71] Users can now save docked structures and binding energies as SDF (Structure Data Format). Thanks to Martin Indarte post in the forum: SDF with binding energies/scores

http://pyrx.scripps.edu/images/Save_SDF.png

[69] Switched back to using wx.TextCtrl in Text editors. This widget can now handle large files (> 5MB - tested with wxPython-2.8.11).

[66] Included an option for exhaustiveness in the Vina Wizard thanks to Martin Indarte post in the forum: Can I change the exhaustiveness in VINA wizard?

See also: List of Changes in PyRx Version 0.7

Last Updated on Monday, 10 January 2011 16:06