Pre-Release 0.5 Updates Print
Written by Sarkis Dallakian   

I've added instructions on how to update to the latest version from Source Code and how to submit a feature equest to Downloads page. The major new feature in 0.5 is database table plotting feature that can be used for BioAssays and ROC Curves. To compare ROC curves generated by two different docking algorithms, I run the dataset from my previous blog post through AutoDock Vina. There are third party packages available for AutoDock Vina such as PaDEL-ADV, VcPpt, MakeVinaCommand and PyMOL plugin. The new version of ADT also has features for working with output files generated by Vina. To explore an option for adding a new Wizard to PyRx for AutoDock Vina, I run AutoDock Vina on our cluster, using a script from Vina Manual. Here are the results:

This is just a proof of concept to show that you can use PyRx to analyse results from different docking programmes.

Last Updated on Thursday, 29 September 2011 09:35